pbsv is a suite of tools to call and analyze structural variants in diploid genomes from PacBio single molecule real-time sequencing (SMRT) reads. The tools power the Structural Variant Calling analysis workflow in PacBio’s SMRT Link GUI. pbsv calls insertions, deletions, inversions, duplic ations, and translocations. Both single-sample calling and joint (multi-sample) calling are provided.
module load miniconda3 conda create -n mypy_py27 python=2.7 source activate mypy_py27 conda install -c bioconda pbsv