pbsv is a suite of tools to call and analyze structural variants in diploid genomes from PacBio single molecule real-time sequencing (SMRT) reads. The tools power the Structural Variant Calling analysis workflow in PacBio’s SMRT Link GUI. pbsv calls insertions, deletions, inversions, duplic ations, and translocations. Both single-sample calling and joint (multi-sample) calling are provided.


module load miniconda3
conda create -n mypy_py27 python=2.7
source activate mypy_py27
conda install -c bioconda pbsv